Two million SARS-CoV-2 whole genome sequences uploaded

The UK has surpassed two million SARS-CoV-2 genome sequences uploaded to the international Global Initiative on Sharing Avian Influenza Data (GISAID) database.

The database was expanded in January 2020 to host SARS-CoV-2 genome sequences and to facilitate rapid sharing of sequenced data. It stores sequences submitted by 240 countries and territories from across the world to inform the global pandemic response.

Genomic sequencing provides a better understanding of how the virus is evolving to help inform the global pandemic response. Significant UK discoveries have been made as a result of genomic sequencing throughout the pandemic. These include identifying the Alpha variant, which helped to explain epidemiological changes in data and transmission, as well as helping to track the emergence and spread of the Delta and Omicron variants as they replaced Alpha in turn.

Susan Hopkins, Chief Medical Advisor to UKHSA, said: “Sequencing two million genomes is a fantastic achievement and a testament to the UK’s scientific strength and expertise. We are hugely grateful to everyone who has worked hard and at incredible speed to make this happen. Global co-operation is key in the fight against Covid-19 and UKHSA is proud to play its part along with public health and academic colleagues from the four nations of the UK. The UK’s genomic sequencing technology is world-leading and we are playing a vital role in informing the global response to the pandemic.”